Biological Oceanography

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Below are brief descriptions of the courses offered in Biological Oceanography. You can follow the link on the course title to see a more detailed syllabus.

OC 440 Introduction to Biological Oceanography (3 credits) Introduction to the ocean as an ecosystem, with emphasis on the processes affecting productivity and structure of oceanic communities. Interactions of biological processes with chemical, physical, and geological processes in the ocean. Effects of light and nutrients on phytoplankton, grazing by zooplankton, microbial activity and recycling, distributional patterns of zooplankton and nekton, ecology of benthic animals, marine fisheries, and pollution problems. Offered annually.
OC 540 Biological Oceanography (3 credits) Introduction to the ocean as an ecosystem, with emphasis on the processes affecting productivity and structure of oceanic communities. Interactions of biological processes with chemical, physical and geological processes in the ocean. Effects of light and nutrients on phytoplankton, grazing by zooplankton, microbial activity and recycling, distributional patterns of zooplankton and nekton, ecology of benthic animals, marine fisheries and pollution problems.
OC 541  Marine Zooplankton (4 credits) Small animal life in the sea: population biology, biogeography, migrations, life cycles, physiology. Role of zooplankton in pelagic ecosystem dynamics is examined through modeling. PREREQ: An ecology course, invertebrate zoology, or OC 440/540. Offered alternate years.
OC 542 Estuarine Ecology and Biogeochemistry (4 credits) Provides an integrated view of the ecologic processes in estuarine environments, with a special emphasis on how these processes impact the biogeochemical cycling of carbon and nitrogen. Major topics include introduction to estuarine systems, including the geomorphology, physical oceanography and chemistry of estuaries; estuarine primary production; detrital food webs and carbon cycling; pelagic and benthic ecosystem processes in estuaries; and abiotic and biotic controls on estuarine nutrient cycling. Class discussions and current literature will also be used to encourage students to integrate lecture topics and achieve a comprehensive understanding of how the physical, chemical, and biological properties of estuaries regulate ecological processes. PREREQ: OC 440/OC 540 or instructor approval.
OC 644  Marine Phytoplankton Ecology (4 credits) Ecology of the heterotrophic and photosynthetic plankton in the oceans; autotrophic, heterotrophic and mixotrophic nutrition; limitation of growth and photosynthesis by light, nutrients and trace elements; grazing and other removal processes; primary productivity and its control in major ocean provinces and in the global ocean; role of marine phytoplankton in the global carbon balance on time scales ranging from seasonal to glacial/interglacial. PREREQ: OC 440/540 or two years of biology. Offered alternate years.
OC 645  Marine Phytoplankton Physiology (4 credits) Life  processes  of  plankton algae: energy-capturing processes, mineral nutrition, flotation mechanisms, cell division. Evaluation of experimental procedures; problems of existence in the open ocean; artificial production of maximum yields. PREREQ: OC 644. Offered alternate years.

OC 646  Physical/Biological Interactions in the Upper Ocean (4 credits) Variability in physical oceanic processes inthe upper ocean and relationship to spatial and temporal variations in biomass, growth rates and other biological patterns in the organisms of ocean surface waters.  The relation between variability in ocean physical phenomena and ecosystem dynamics, including the requirements of sampling design for upper ocean ecological studies.  Time and space scales of physical and biological phenomena in the upper ocean. PREREQ: OC 430/530 and OC 440/540 or consent of instructor.  Offered alternate years.

OC 647  Marine Microbial Processes (4 credits) Roles of prokaryotic and eukaryotic microbes in the biological and chemical processes of  the sea, with emphasis on pelagic ecosystems. Functional and taxonomic types and distribution of marine microorganisms.  Biochemical and physiological processes of major groups of microbes as these relate to geochemical cycles of biologically active elements in the sea.  Heterotrophic and mixotrophic protists in pelagic foodwebs. Discussion of current experimental approaches to determining aspects of microbial activity and production. PREREQ: Two years of biology, OC 440/540, or consent of instructor. Offered alternate years.
OC 648  Marine Benthic Ecology (4 credits) Ecology of marine benthic organisms with emphasis on soft-sediment systems. Sedimentology, fluid mechanics and geochemistry of the soft-sediment environment with a focus on the influence of the sedimentary environment on functional morphology, foraging ecology, and dispersal/settlement. Examination of equilibrium and disequilibrium processes that structure soft-bottom benthic communities. Discussions of current literature. Field trip to Yaquina sand flat. Offered in the fall of odd years.
 
OC 649  Special Topics in Biological Oceanography (1-4 credits) Special  topics  of current interest in biological oceanography not covered in detail in other courses. May be repeated on different topics for credit.
OC 649-1 Special Topics/BioOptical Oceanography (3 credits) Interdisciplinary exploration of ocean optics and the processes which influence optical measurements in the sea. Inherent and apparent optical properties of water; absorption, scattering, and the underwater light field. The role of phytoplankton cells as particles, light absorption for photosynthesis, phytoplankton fluorescence, temporal and spatial variability in BioOptical properties. Optical sampling of the ocean; sampling limitations, instrumentation, in situ and remote sensing applications.  PREREQ: OC 430 / 530 and OC 440/540, or equivalent.  Offered varying years.

 

 

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